skip to content
 

Materials Modelling Seminar

Professor Kazuto Akagi, Advanced Institute for Materials Research, Tohoku University

Tuesday 6th Mar, 11:00

Goldsmiths 1 (0_017), Department of Materials Science & Metallurgy

Title: Computational Homology and Materials Science

Abstract:

Finding relationship between structure and property is one of the essential subjects in materials science. However, it is still difficult to notice what is the structural motifs or hierarchical information characterizing complex systems. Computational homology based on “persistent homology” [1] is a powerful framework to detect and describe the "shape" in discrete data such as atomic configurations or pixel images. The obtained geometrical information is contracted as a two-dimensional map called “persistence diagram (PD)”, in which birth and death of N-dimensional holes are recorded.

From the view point of materials science, the advantage of this mathematical method is summarized as follows:
(1) Detecting hidden order in the system.
(2) Providing “finger prints (or descriptors)” of complex systems.
(3) Enabling us to treat “inverse problems”.

In this talk, I will introduce the key points of computational homology for materials scientists. After that, we will see how it works in the analysis of molecular dynamics simulations and experimentally observed images, respectively.

[1] Y. Hiraoka et al., PNAS 113, 7035-7040 (2016).

talks.cam: http://talks.cam.ac.uk/talk/index/102214

Latest news

Prof. Chris Pickard - Plenary speaker at AI for Materials Discovery Symposium in Nanyang Technological University in Singapore

11 February 2026

During his visit to Nanyang Technological University (NTU) in Singapore, Prof. Chris Pickard played a leading role in a symposium on AI for materials discovery ( https://www.ntu.edu.sg/mse/news-events/events/detail/2026/01/...

Welcome to Will Galloway and Dr. JiuYang Shi !

25 November 2025

Will Galloway has joined the MTG as a new PhD student in October. Dr. JiuYang Shi will collaborate with MTG, he is a postdoc in Prof. Angelos Michaelides group.

AIRAPT Conference in Matsuyama (Japan)

28 September 2025

Dr. Ryuhei Sato (Assistant Professor at Tokyo University) and Dr. Maélie Caussé attended the 2025 AIRAPT Conference.

Dr. Ruyhei Sato and Kim Kamsma visiting MTG. And Welcome to Stefano Racioppi !

1 September 2025

Dr. Ruyhei Sato from Tokyo University and Tim Kamsam (PhD student in Utrecht University in Theoretical Physics and Mathematics) visited Material Theory Group this summer for few months ! Picture of the MTG (from left to...

Chris Pickard on the American Scientist podcast

24 July 2025

MTG group leader Chris Pickard was featured on the American Scientist podcast this month. Access the podcast using this link to hear Chris discuss a range of topics, from future research directions of the group, to pondering...

CS2PA Workshop in Poitiers (France)

20 June 2025

The first edition CS2PA workshop, a series of hands-on tutorials on Crystal Structure Prediction & Machine-learned potentials was held in Poitiers University (France), (see program of CS2PA ) MTG leader Chris Pickard and...

Congratulations Pascal Salzbrenner !

10 June 2025

Dr. Pascal Salzbrenner completed his PhD on High-throughput Ab Initio Phase Diagram Prediction in 2025.